Class | Description |
---|---|
AANameConverter | |
AlignmentMakerUniversal |
Make a MSA by Clustal of given sequences.
|
CreateListWithParams |
Create an object with parameters calculated for single protein.
|
FastaFileReader |
Class gets the fasta sequences out of the fasta file.
|
Main_CreateListWithParams_SINGLE |
Create a file with parameters calculated for single protein.
|
ParamAnalysis |
Calculates each parameter used in: PPWozniak, BM Konopka, GVriend, MKotulska, "Forecasting residue-residue contact prediction accuracy"
|
QS_double |
Quick-sort.
|
ReadFile |
Gives a whole containing of a file in a single String.
|
ScratchReader |
Parse SCRATCH .ss and .acc20 files.
|
TopMethods |
Sort DCA results and provide sorted values and their indexes.
|