public class Main_CreateListWithParams_SINGLE
extends java.lang.Object
Constructor and Description |
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Main_CreateListWithParams_SINGLE() |
Modifier and Type | Method and Description |
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static void |
main(java.lang.String[] args) |
public static void main(java.lang.String[] args)
args
- - table with:
1) path to DCA results file;
2) path to SCRATCH .ss file;
3) path to SCRATCH .acc20 file;
4) path to FASTA file;
5) path to MSA file;
6) true - if each line in the MSA file is a separate sequence (no FASTA headers) - false otherwise;
7) separation between two amino acids in sequence to treat them as contacts;
8) number of strongest predicted contacts in DCA results file to calculate parameters for;
9) number of column in DCA result file with sequence number of first amino acid in contact (start with 0);
10) number of column in DCA result file with sequence number of second amino acid in contact (start with 0);
11) number of column in DCA result file with DCA result;
12) separator of columns in DCA file;