Class AANameConverter

java.lang.Object

AANameConverter

public class AANameConverter
extends java.lang.Object

Author:

Pawel P. Wozniak Class changes 3 letter symbols of aminoacids into 1 letter symbol and backward.

Constructor Summary

Constructors

Constructor and Description
AANameConverter()

Method Summary

Methods

Modifier and Type	Method and Description
java.lang.String	AA1toAA3(char aa)
char	AA3toAA1(java.lang.String aa)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AANameConverter

public AANameConverter()

Method Detail

AA3toAA1

public char AA3toAA1(java.lang.String aa)

Parameters:

aa - - 3 letter code of aminoacid

Returns:

1 letter code of aminoacid aa (if bug then return 'X')

AA1toAA3

public java.lang.String AA1toAA3(char aa)

Parameters:

aa - - 1 letter code of aminoacid

Returns:

3 letter code of aminoacid aa (if bug then return 'XXX')