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ifACCPass(int, int, List<Integer>, double, boolean)
- Static method in class
Filters
ifACCPass(int, int, List<Integer>, double, boolean)
- Static method in class
Terminus
ifAllTheSame(int, int)
- Method in class
QS_double
ifBurExpDCAPass(int, int, List<Integer>, double, double, double)
- Static method in class
BuriedExposed
ifBurExpDCAPass(int, int, List<Integer>, double, double, double)
- Static method in class
Filters
ifConservMarksPass(MSAanalysis, int, int, String, String, boolean)
- Static method in class
Filters
ifConservMarksPass(MSAanalysis, int, int, String, String, boolean)
- Static method in class
HighlyConserved
ifEntropyPass(MSAanalysis, int, int, double, boolean, boolean)
- Static method in class
Filters
ifEntropyPass(MSAanalysis, int, int, double, boolean, boolean)
- Static method in class
LowEntropy
ifFirstCysMarksPass(int, int, String, String, List<String>)
- Static method in class
Filters
ifFirstCysMarksPass(int, int, String, String, List<String>)
- Static method in class
NonStrongestCysCys
ifGapsFreqPass(MSAanalysis, int, int, boolean, double)
- Static method in class
Filters
ifGapsFreqPass(MSAanalysis, int, int, boolean, double)
- Static method in class
FrequentGaps
ifPassInterNextSS(List<int[]>, int, int, int, int, int)
- Static method in class
Filters
ifPassInterNextSS(List<int[]>, int, int, int, int, int)
- Static method in class
InterSecondary
ifPassIntraSS(List<int[]>, List<String>, int, int, String, int)
- Static method in class
Filters
ifPassIntraSS(List<int[]>, List<String>, int, int, String, int)
- Static method in class
IntraSecondary
ifPassIntraSSMarks(List<int[]>, List<String>, int, int, int)
- Static method in class
Filters
ifPassIntraSSMarks(List<int[]>, List<String>, int, int, int)
- Static method in class
SecondaryStraddling
ifSeqSepPass(int, int, double, int)
- Static method in class
Filters
ifSeqSepPass(int, int, double, int)
- Static method in class
InterTerminus
Index
- Variable in class
QS_double
IndexInit()
- Method in class
QS_double
InterSecondary
- Class in
<Unnamed>
Run inter-secondary structure filter and create report of filtered-out contacts.
InterSecondary()
- Constructor for class
InterSecondary
InterTerminus
- Class in
<Unnamed>
Run inter-terminus filter and create report of filtered-out contacts.
InterTerminus()
- Constructor for class
InterTerminus
IntraSecondary
- Class in
<Unnamed>
Run intra-secondary structure filter and create report of filtered-out contacts.
IntraSecondary()
- Constructor for class
IntraSecondary
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